Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLGNYSSATEFFLLGFPGSQEVCRILFATFFLLYAVTVMGNVVIIITVCVDKCLQSPIYFFLGHLCVLEILITSTA-VPFMLWGLLLPSTQIMSLTACAAQLYLYLSLGTLELALMGVMAVDRYVAVCNPLRYNIIMNSSTFIWVIIVSWVLGFLSEIWPVYATFQLTFCKSSVLDHFYCDRGQLLKVSCEDTLFREFILFLMAVFIIIGSLIPTIVSYTYIISTNLKIPS--------------------ASGWRKSFSTCASHFTYVVIGYGSCLFLYVKPK
2Z73 Chain:A ((33-282))
---------------------VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFL-KKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTL----EGVLCNCSFDYISR-----DSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQ
General information:
TITO was launched using:
RESULT:
Template:
2Z73.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -260512 for 1728 contacts (-150.8/contact) +
2D Compatibility (PS) -23045 + (NN) -3930 + (LL) 1100
1D Compatibility (HY) -17200 + (ID) 1850
Total energy: -305437.0 ( -176.76 by residue)
QMean score : 0.252
(partial model without unconserved sides chains):
PDB file :
Tito_2Z73.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z73-query.scw
PDB file :
Tito_Scwrl_2Z73.pdb
: