Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAERNYTVVTEFFLTAFTEHLQWRVPLFLIFLSFYLATMLGNTGMILLIRGDRRLHTPMYFFLSHLSLVDICYSSAI-IPQMLAVLWEHGTTISQARCAAQFFLFTFFASIDCYLLAIMAYDRYTAVCQPLLYVTIITEKARWGLVTGAYVAGFFSAFVRTVTAFTLSFCGNNEINFIFCDLPPLLKLSCGDSYTQEVVIIVFALFVMPACILVILVSYLFIIVAILQIHSAG--------------------GRAKTFSTCASHLTAVALFFGTLIFMYLRDNTGQ---SSEGDRVVSVLYTVVTPMLNPLIYSLRNKEVKEATRKALSKSKPARRP |
2Z73 Chain:A ((33-334)) | ----------------------VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYT----LEGVLCNCSFDYIS-----RDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -290679 for 2301 contacts (-126.3/contact) +
2D Compatibility (PS) -28893 + (NN) -10006 + (LL) 2456
1D Compatibility (HY) -22000 + (ID) 2200
Total energy: -351322.0 ( -152.68 by residue)
QMean score : 0.336
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