Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITFLPIIFSILIVVIFVIGNFANGFIALVNSIEWVKRQ-------KISFVDQILTALAVSRVGLLWVLLLHWYATQLNPAFYSVEVRITAYNVWAVTNHFSSWLATSLSMFYLLRIANFSNL---------------IFLRIKRRVKSVVLVILLGPLLFLVCHLFVINMDETVWTKEYEGNVTWKIKLRSAMYHSNMTLTMLANFVPLTLTLISFLLLICSLCKHLKKMQLHGKGSQDPSTKVHIKALQTVTSFLLLCAIYFLSMIISVCNFGRLEKQPVFMFCQAIIFSYPSTHPFILILGNKKLKQIFLSVLRHVRYWVKDRSLRLHRFTRGALCVF |
1N2S Chain:A ((1-298)) | ----------MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRP--DVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVY----------AGKGNN---FAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALN-------KPEVAGLYHLVAGGTTTWHDYAALVFDEARKA-----GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEMFTTTT------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N2S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -316657 for 2366 contacts (-133.8/contact) +
2D Compatibility (PS) -29307 + (NN) -4033 + (LL) 3948
1D Compatibility (HY) 12000 + (ID) 1600
Total energy: -335649.0 ( -141.86 by residue)
QMean score : 0.179
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