Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MKIKLFFIFTLLFFD-ASTYCSCEDIIESIEICK--EYTCQQYIGNEDFIEHKILGLSSKDLCVYIEKQDNDEM-VCHHSKYGMMMEKKYLESIFKVGNQEINDF-IDIANL-RA-KECFFISNQKTSYTNR-DYIIKEA-VESNFDVLSQYNDIKSIFFDKE-SVNKMVSEMKKF--NLRSSRAAKE-EI-LDNFNSKVVSLDSILYLSPDTWKIWVN-RK--------------LFTNTKNLKVYSVTENYVTFVWTVNQKMTKKQPNDSKNVYFGYG-----NIMFTLYPKQKFDLDSLSIK |
| 2Q4Z Chain:A ((4-310)) | CVAEEPIKKIAIFGGTHGNELTGVFLVTHWLKNGAEVHRAGLEVKPFITNPRAVEKCT-RYIDCDLNRVFDLENLSKEMS-EDLPYEVRRAQEINHLFGPKNSDDAYDVVFDLHNTTSNMGCTLILGDSGNDFLIQMFHYIKTCMAPLPCSVYLIEHPSLKYATTRSIAKYPVGIEVGPQPHGVLRADILDQMRRMLKHALDFIQRFNEGKEFPPCAIDVYKIMEKVDYPRNESGDVAAVIHPNLQDQDWKPLHPGDPVFVSLDGKVIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTKLTLNAKSIRST |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55889 for 2068 contacts (-27.0/contact) +
2D Compatibility (PS) -27306 + (NN) 12613 + (LL) 232
1D Compatibility (HY) -2000 + (ID) 1350
Total energy: -73700.0 ( -35.64 by residue)
QMean score : 0.143
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