Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLSIIVIIGIFIITGCDWQRTSKEPSKNAQNQQVIKIGYLPITHSANLMMTKKLLSQYNHPKYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQKGSNIKAVA-LGHHE-GNVIMGQKGM-HLNEFNNGDDYHFGIPHRYSTHY-LLLEELRKQLKIKPGHFSYHEMSPAEMPAALSEHRITGYSVAEPFGA-L-----GEKLGKGKTLKHGDDVIPDA-YCCVLVLRGELLDQHKDVAQAFVQDYKKSGFKMN--DRKQSVDIMTHHFKQSRDVLTQSAAWTS----YGDLTIKPSGYQEITTLVKQHHLFNPPA---YDDFVEPSLYKEASRS--- |
| 3QSL Chain:A ((28-345)) | ---------------------------QKLEKAKVQIAVGGKPLIYYLPLTIAEVK-GFFKDEGLDVSIADFAGGSKALQAVVGGSADVVSGAFEHTLSLQAKGQFYRAFALQGRAPMIGVGVSKKNLPGYKGPADLKGRKIGVTAPGSSTNMVVNFFLAKHGLKASDVSFIGVGAGAGAVTALRSGQIDAISNTDPVVSMLETSGDIQIIVDTRTLKDTKEIFGGNMPAGCLYAPQAFVDANPNTAQALTNAIVRADKWIQKAGADEIAKAVPEGYLLGDPAVYKAAIGKSMEGLSPDGVIPEDGAATALKALAAFVPDFDAAKVDPAKAWTNEYTRRANEKYPN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QSL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85453 for 2671 contacts (-32.0/contact) +
2D Compatibility (PS) -32165 + (NN) -14615 + (LL) 2564
1D Compatibility (HY) -2000 + (ID) 2200
Total energy: -133869.0 ( -50.12 by residue)
QMean score : 0.338
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