Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKNYSYKNIQAIDFTQLNDEEKLLVLEFRNHPNTALWMYSA-NISLKTHLQFIEDLKNSPSHRYF-LFKEESVYLGVGSITKINFFHKHGYLGIYKNPFLK--NKGGTILKALERIAFEEFQLNSLHLEVMENNFKAIAFYEKNHYELEGRLKGFISKDKEFIDVLLYYKDKKGYNDQSPLKL
3TTH Chain:A ((5-168))
----------KKIRLSALEREDLKFVHELNNN--IMSYWFEEPYESYRELEDLHIKHIHDQSERRFIIKDLKDNKVGLVELTEIDFIHRRCEFAIIISPGEEGKGYATEATDLTVEYAFSILNLHKIYLLVDEDNPAALHIYRKSGFAEEGKLVDEYYSKGRYRTAIRMYVLKK----------
General information:
TITO was launched using:
RESULT:
Template:
3TTH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47768 for 1086 contacts (-44.0/contact) +
2D Compatibility (PS) -16903 + (NN) -4616 + (LL) 512
1D Compatibility (HY) -6000 + (ID) 1650
Total energy: -76425.0 ( -70.37 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_3TTH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TTH-query.scw
PDB file :
Tito_Scwrl_3TTH.pdb
: