Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLISIAFLLVLCLLNYSSFRMLKSFLTLKKISRYAYLGFFILLSAGEATFVFYRNVMPSHLFVLTSACSFVSFIAFVFSLSFYGFSYSVEKIDFLPSRRKGLKNFLRIGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQKDFVNYIVEEVNQKEVDMVLIGGDLVDENIE-KVKSFLLPLNNLKSTHGTFYVPGNHEYYHGIEPILSFLN-----------------------TLDMTILGNECVHLGGINLCGVYDYFAR----KRQDFAPDIDKALKKRDSSKPTILLAHQPKQIR------------------SLKESHSIDLVLSGHTHAGQIFPFSLLVKLAQTYLHGLYKHSGTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQA |
| 3RL5 Chain:A ((57-277)) | ---------------------------------------------------------------------------------------------------------------------------------------------AGHTRFVCISDTRSRTDG-----------IQMPYGDILLHTGDFTELGLPSEVKKFNDWLGNLP-YEYKIVIAGNHELTFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPW-GWGFNLPRGQSLLDK-WNLI-PEGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGY----------------GTMT--DGYTTYINASTCTVSFQPTNPPIIFDLPNP------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98252 for 1345 contacts (-73.0/contact) +
2D Compatibility (PS) -18795 + (NN) -9842 + (LL) 15564
1D Compatibility (HY) -5200 + (ID) 1600
Total energy: -118125.0 ( -87.83 by residue)
QMean score : 0.334
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