Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDDKLPVVHSIKTINDVSSVGFEWSKVADTYDIDGFVLYRLKKDSKLKRIATIKNPYATHYYDEGLETESSYTYQLATYKGDKISKLSEPILVKTSFINPVESVFASLEYPKSVKVFWSPHPNPSVSKYIIQRQNKDGKFLNVGAVKNRLFVEFFDKDLEDGQKYRYQIIAENFMGDKSRPSVIVEGKTKDLPKEIANVRVSQNLT-RQIELSWDKSPEEDVIAYRIYASNNRNDKYKFIAQ-TTNTSYVDKIEKDNLTRYYKVVAVDKTHLEGALPKEPAMGETSDRPEAPIITKGTIQDSSALIQWENNPSPKIATYAVYRFEANSKTPLRFGNITQNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRLFLER |
3MPC Chain:A ((3-98)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAPAFPTGLSAVLDSSGNTANLTWNAAP--GANSYNVKRSTKSGGPYTTIATNITSTNYTDTGVATGTKYYYVVSAVSNGVETLNSAEAILQYPKLEH------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20041 for 649 contacts (-30.9/contact) +
2D Compatibility (PS) -10031 + (NN) -4094 + (LL) 20768
1D Compatibility (HY) 1600 + (ID) 900
Total energy: -12698.0 ( -19.57 by residue)
QMean score : 0.537
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