Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRCLTCLKLSFKPLCPNCLNDLPLSLKLRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILP-LLSQKAGAEFVKILQEQGLNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGK-SLEFRANNPRN-FTFRG--D-ESLDYFLLDDIITTGTTLKEALKYLKTLNIKAHFAIALCSADE
1L1Q Chain:A ((33-154))
--------------------------------------------------------STPAALDAVRKEVTAHYKD-----VPITKVVGIES-----RGFILGGIVANSLG----VGFV-ALRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEI
General information:
TITO was launched using:
RESULT:
Template:
1L1Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57194 for 850 contacts (-67.3/contact) +
2D Compatibility (PS) -12089 + (NN) -1191 + (LL) 5420
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -69054.0 ( -81.24 by residue)
QMean score : 0.324
(partial model without unconserved sides chains):
PDB file :
Tito_1L1Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L1Q-query.scw
PDB file :
Tito_Scwrl_1L1Q.pdb
: