Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIKKSELYSSLWAGADSLRGGMDASEYKNYVLNLLFLKYISDKAKNNMDSEIEVPQGCFYEDILALEGDKEIGDKLNKIIAKIAERNDLKGVIDSVDFNDNTKLGEGKAMIDTLSNLVKIFADLSLGAHGALDDDLLGDAYEYLMRHFASESGKSKGQFYTPSEVSLLLSLLLGIDENTRQDKSIYDPTCGSGSLLLKASSLAGKKGLTIYGQEKDISTTALCKMNMILHNSATADIAKGGSSTLSNPLFTTENGMLKTFDYVVANPPFSLKNWTDGLSIDPKSKQVINDSFNRFEDGTPPEKNGDFAFLLHIIKSLNPTGKGAVILPHGVLFRGNAEAQIRKNLLMKGYIKGVIGLAPNLFYGTSIPACVIVLDKENAHARKGVFVIDASKDFKKDGNKNRLREQDVQKMIDTFNALKEIPYYSKMVSLEEISLNDYNLNIPRYIAAKQELEKDLFALINSPSYLPKNEIKAYDPYFQVFKELKNTLFKKSDKEGYYALKTECENIKDLITQSLEYQTFHASVLSAFESLDLFTTFNDLEPGFNPKTLIESVCSKVLKEFEKVGILDKYGVYQLFKDYYNEVLQDDWFLISFNGFRSAKELRKLTPLKDKNKKANYLEEPDFIVQKTYYKSDLIPKHLIKQRFFEKETKELEELENALNEKEALLDEFIEEHSNEEGLFDGLKINESVLKKELKNATDLEDKQILKTALEWLEAKNKALKMKNKAYEELELKAFHQYKNLEINEIKDLIIKDKWLNSLKNALENKIQKRTNAFASALNEIISSYSNSLLELDKEVKESESKVLEHLKDLGLMG |
3TMA Chain:A ((186-322)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------SLTPVLAQALLRLADA----RPGMRVLDPFTGSGTIALEAASTL-GPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRA--DARHLPRF------FPEVDRILANPPHGL-----KE-----------GLFH-----------LYWDFLRGALALLPPGGRVALLTLRPALLKRALPPGFALRHARVVEQGGVYPRVFVLEKL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TMA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46266 for 1036 contacts (-44.7/contact) +
2D Compatibility (PS) -14538 + (NN) -11475 + (LL) 43396
1D Compatibility (HY) -1200 + (ID) 1500
Total energy: -31583.0 ( -30.49 by residue)
QMean score : 0.346
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