Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGILNVLLVFALIAGLSVPSSMQVEAAAPTIKVHFIDVGQGDAIYIKAPSGEDILIDAGNKGKGKTVVNYLKKLKV--KDIEIMIASHSDADNIGGLPEVMNNIKVKNLYAPKSTNTT--AA------YKNFVNTAKKKKLTIKTAKAGVKLPVKGVNAQFVGPV-KTYGKTDRNNWSAVLHVAY----KKNTFLFTGDAQTKAENDM----------------IKAKKTLRADVLKVSTQGSKAATSKAFVNVVKPKYAIISVGK-NGYGHPTSQTVNTLKKAKAKVYRTDRNKTVVVTGNGSSYSIGK |
| 1K07 Chain:A ((16-240)) | ---------------------------------NLYYVGTDDLASYLIVT-PRGNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQTKA-KYMVMDEDVSVILSGGKSDFHYANDSSTYFTQSTVDKVLHDGERVELGGTVLTAHLTPGHT-------RGCTTWTMKLKDHGKQYQAVIIGSIGVNPGYKLVDNITYPKIAEDYKHSIKVLESMRCDIFLGSHAGMF---------DLKNKYVLLSKGQNNPFVDPT------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35053 for 1517 contacts (-23.1/contact) +
2D Compatibility (PS) -20313 + (NN) -944 + (LL) 5644
1D Compatibility (HY) -5200 + (ID) 1850
Total energy: -57716.0 ( -38.05 by residue)
QMean score : 0.421
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