Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MSLF----FEEWGPILWQGFLETLTMTG--ITLVISLAIGLPLGVFLTLTRKGGQ-SENLVAYSILNWVINILRSLPFIILLFLMIPVTR------FVV-----GTTIG------------IQGVI-MPLVVFTAPYIARLMESALLEVDRGVVEAYQAMGISTPKIIWSVV----------------IREARSGIVLGLTIATIGLIGATAMAGLVGAGGLGTIAYQYGF------------QRFEPTVMYTTIIILIIMVQALQSFGNF-LSRRLKKD----------- |
| 4L5C Chain:A ((24-312)) | KVKVGIIGGSGFDDPNLFKKVGVRQVTTPFGKPSDTLVEGFVGDVACVVLPRHGKGHLIPPSEVNYRANVWALKDL-GCTHILATNACGSLQEDLVPGDFVVLNQFMDKTWGRENTFYGSKPDSLKGVLHMPM---AEPFCERTRQILIQAARNKSINVYDKKTMDKSACIHPCVHAEGSAVTINGPRFSTRCESFIHKAMGLDIVNMTLVPEVSLAREAGL-SYASIAIVTDFDCWKSEEEHVCVDMVLEQFRKSVVHVREILLEAVALIGAEDWTKTIEANKALVMSSRQDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -246734 for 1573 contacts (-156.9/contact) +
2D Compatibility (PS) -22537 + (NN) -1021 + (LL) 444
1D Compatibility (HY) -8400 + (ID) 2050
Total energy: -280298.0 ( -178.19 by residue)
QMean score : 0.203
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