Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MKNILLVCNAGMSTSFLVEKMKAAGTEQGVEANIWAVSDAELHENW-EKADVILLGPQVGYLKGN-TEKVVGGK-IPVEVIN-MLDYGRVNGAAVLERAIELIG
3NBM Chain:A ((5-108))
KELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAH-YDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIVATRGMEYIHLTKSPSKALQFVLEHYQ
General information:
TITO was launched using:
RESULT:
Template:
3NBM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59835 for 744 contacts (-80.4/contact) +
2D Compatibility (PS) -10876 + (NN) -3168 + (LL) 44
1D Compatibility (HY) -400 + (ID) 650
Total energy: -74885.0 ( -100.65 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_3NBM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NBM-query.scw
PDB file :
Tito_Scwrl_3NBM.pdb
: