Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSELKLKSFEIRKDVLKMIYDAKTGHTGSDLSCADILVALCYGVLNVNPENPEALDRDRYVQSKGHAVEVLWAVLADKGF-FAKEELADFSAFGSRIIGHPN-NKVAGIEMNTGSLGHGLSVSVGMALAAKM----------DGKSYHTYTLMGDGELAEGSVWEGAMAAANYKLDNLTAIIDRNSLQISGRTEDVMSVEPLADKWRAFGWDVI-EADGNNPDKL-QAIFKTVNETGKPRLIIAKTIKGYGVKMAENVAKWHHYVPSSEEYEIAMKDLEERMEACRHE |
2R8O Chain:A ((2-250)) | -SSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFT-DDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTDKPSLLMCKTIIGFG------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R8O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84736 for 2050 contacts (-41.3/contact) +
2D Compatibility (PS) -25968 + (NN) -13745 + (LL) 3956
1D Compatibility (HY) -11200 + (ID) 4400
Total energy: -136093.0 ( -66.39 by residue)
QMean score : 0.456
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