Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKQSADKRRIEKNDKPFFYLADTVWSAFTNIDLTDWAYYLKVRKEQGFNVLQINILPQWDRSVLKKIQEPFGINEGFFDLKAKNEAYFKHAEKMLEMAVNQGFTPALVLLW------CNYIPETWGAKFGT-----SPLFRKEDIKPYTEMMLE-----HFEQF-EPI-YIISGDTDFPTETVTDYYLEALETVSKKAPHALKVLHICGRLKDIPENLQT-HPALDLYFYQSGHNSEHQSMAYTLAEHFSQLEPIKPVINSEPCYELMG-YSRQKYGRFSREDVRKAAWQSVLSGAIAGISYGAHGIWSWHEEGSTFGSALGEGFVSPFNWRQALHFEGA--TDYAFLKSFILANDLTTLAPINLVLNQTPEIRAAETEKVVIIYVPSNVPIYLKGQFVSLDDYAIDLEQGKKVSLAKILHEEKTEIQMTPFLKDSLYVIHK |
| 3THD Chain:A ((9-348)) | -FEIDYSRDSFLKDGQPFRYISGSIHYSR--VPRFYWKDRLLKMKMAGLNAIQTYVPWNFH--------EP---WPG-----QYQFSEDHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACDFDYLRFLQKRFRHHLGDDVVLFTTDGAHKTFL-KCGALQGLYTTVDFGTGSNI---TDAF---LSQRKCEPKGPLINSEFYTGWLDHWGQP-HSTIKTEAVASSLYDILARGA-SVNLYMFIGGTNFAYWNGANSP--YAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKF--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3THD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114005 for 2455 contacts (-46.4/contact) +
2D Compatibility (PS) -32700 + (NN) -18077 + (LL) 10308
1D Compatibility (HY) -4400 + (ID) 2350
Total energy: -161224.0 ( -65.67 by residue)
QMean score : 0.329
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