Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPQKMTEHIITQALRINASDVHIHPLSNRYLLRLRVNGTLIPLL--YLPIDVGEKLISFLKFQAALDISEKRRPQSGSFEKNTNTEKIALRLSTM-PSK-D-FHESMVIRIFRYKHPIP---FLNSSVFP-----------------------RSTKQIQQQCKNQTGLFLFSGSTGSGKSSSMYSLASSIENKDELQIITIEDPVEHYSPGFL-------QIEVNEKASITYAPIIRSVLRHDPDILIIGEIRDAETAKIVIRAALTGHL-VLSTVHAGDAYGVLLRLLEFGIS------------SEELAQCLLGISFQKLTLLVCAFCGEKCHPLCTHLRRKRTAIYEVLTKQDIKAYFQSNQQQIEPKYPIKRTFEKGVSYGFFSAY |
| 2GZA Chain:A ((27-332)) | ------EPLRPWLDDPQITEVCVNRPG---EVFCERASAWEYYAVPNLDYEHLISLGTATARFVDQDISDS----RPVLSAILP---MGERIQIVRPPACEHGTISVTIRKPSFTR-RTLEDYAQQGFFKHVRPMSKSLTPFEQELLALKEAGDYMS-FLRRAVQLERVIVVAGETGSGKTTLMKALMQEIPF--DQRLITIEDVPELFLPDHPNHVHLFYP--------VTAATLLRSCLRMKPTRILLAELRGGE-AYDFINVAASGHGGSITSCHAGSCELTFERLALMVLQNRQGRQLPYEIIRRLLYLVVDVVVHVHNGV------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142816 for 1779 contacts (-80.3/contact) +
2D Compatibility (PS) -26177 + (NN) -7264 + (LL) 6748
1D Compatibility (HY) -5600 + (ID) 2500
Total energy: -177609.0 ( -99.84 by residue)
QMean score : 0.408
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