Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFIYGPIFREFRLNRQF----SLKQVASNELSVSQLSRFERGESDLSLTKFL----GALEAIDLSISEFMYRVNKYQKSDQISLMSQMAQYHYQRDVAGLEKMISVEEGKLKKDSSDIRCRLNIVLFRGMICECDSSRKMSEEDLCFLSDYLFQKDSWEISDYILIGNLYRYYNTRYICQLVKEVINQKEYYRDIYTNRNVVEATLLNVVETLIERRALEEATFFVEKVEALLNNERNAYHR--IILLYEKGFLAYAKGDSRGIQSMKQAIFCFQAIGSKHHVENFQEHFNRVTRL |
| 4D79 Chain:A ((3-268)) | VVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIG----GVGSWAAEALARTGIGAITLIDM---------------DDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPE-----CRVTVVDDFVTP-DNVAQYMSVGYSYVIDAIDS--------------------VRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTD-LAKTIQDPLAAKLRERLKSDFGVVKNSKGKLGVDCVFSTEALVYP-----GFGAATMVTATFGFVAVSHALKKMMAKAARQG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75519 for 1955 contacts (-38.6/contact) +
2D Compatibility (PS) -23760 + (NN) 2116 + (LL) 3516
1D Compatibility (HY) -5200 + (ID) 1800
Total energy: -100647.0 ( -51.48 by residue)
QMean score : 0.195
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