Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--M-DPKKI-ARINELSKKKKTVGLTGEEKVEQAKLREEYIEGFRRSVRHHVEGIKLVDDEGNDVTPEKLRQVQREKGLHGRSLDDPNS--
4OI6 Chain:A ((9-89))
AHFMDVHRGMHGITSDQLHQAHQADLAVEKDENVHFEQAWADPASGTIYCLSEGP----------SAEAVQRVHERAGHKADEIHEVPLSA
General information:
TITO was launched using:
RESULT:
Template:
4OI6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 39373 for 511 contacts (77.1/contact) +
2D Compatibility (PS) -7674 + (NN) 888 + (LL) 248
1D Compatibility (HY) 800 + (ID) 500
Total energy: 33135.0 ( 64.84 by residue)
QMean score : 0.193
(partial model without unconserved sides chains):
PDB file :
Tito_4OI6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OI6-query.scw
PDB file :
Tito_Scwrl_4OI6.pdb
: