Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYIEILGQNAKKASQSVARLSTASKNEILRDLARNIVADTETILTENARDVAKAKDNGISEIMVDRLRLNKDRIQAIANGIYQVADLADPI-GQVVSGYT---NLDGLKILKKRVPLGVIAMIFE-SRPNV-SVDAFSLAFKTGNAIILRGGKDAIFSNTALVNCMRQTLQDTGHNPDIVQLVEDTSHVVAEELMQATDYVDVLIPRGGAKLIQTVKEK-SKIPVIETGVGNVHIYIDEFADLDMAAKIVINAKTQR-PSVCNAAEGLVVHQAIAKGFLSQLEKMLKESNQSVEFRADEE------------------------------------ALQLL--ENAVA---ASESDYATEFLDYIMSVKVVDSFEQAISWINKYSSHHSEAIITNNISRAEIFQDMVDAAAVYVNASTRF-TDGFVFGLGAEIGISTQKLHARGPMGLEALTSTKYYINGTGQVRE |
| 3PRL Chain:A ((49-483)) | -EEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKP----KKSAI-GE-------VSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADA----GAPEGIIQVVTGRG-SVIGDHLVEHPGIDMITFTGGTTTGERISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQ----LTV-GSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGV----QGIKPSLLSMTRERVTVLNL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PRL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182270 for 3282 contacts (-55.5/contact) +
2D Compatibility (PS) -41978 + (NN) -12376 + (LL) 1744
1D Compatibility (HY) -9600 + (ID) 3800
Total energy: -248280.0 ( -75.65 by residue)
QMean score : 0.430
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