Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASIIYSPKDIFEQDFKVSMRGYDKKEVDVFLDDVIKDYENYLEQIEKLQMENRRLQQALDKKESEASNVRNSGTAMYNQKPIAQSATNFDILKRISRLEKEVFGRQIRE
1GD2 Chain:E ((28-65))----------------------------EDHLKALETQVVTLKELHSSTTLENDQLRQKVRQLEEELRIL----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1GD2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2882 for 142 contacts (20.3/contact) +
2D Compatibility (PS) -4364 + (NN) -3758 + (LL) 4704
1D Compatibility (HY) -400 + (ID) 400
Total energy: -1336.0 ( -9.41 by residue)
QMean score : 0.555

(partial model without unconserved sides chains):
PDB file : Tito_1GD2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GD2-query.scw
PDB file : Tito_Scwrl_1GD2.pdb: