Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKKNNYDLMYFIPLVFLIYPIGGILYYHYPFWTLFFTLAFVGAYLYSVIIRGESKYHMIAWSTMLTYIFYMTIFINSGFIWYIYFLSNLLVYRFRDKLKSFRFISFACTLATVVFLCFFKASDFGDRIMFLIVPIFCIGYMWIAIENRNSEEQREKIAEQNQYINILSAENERNRIGRDLHDSLGHTFAMMTLKTELALKLLEK-----RNYDKVQKELSELNHI--SHQSMSEVRQIVSNLKY--------------RTVVEEIDEL----YRLFQLSN-----IK---LTVVNKLETSQLSPVTQSTITMILKELSNNIVKHAEAD--------SVELSLVRQGATINIEMIDNGCGFTN----------------------LDGDEFHSIQERLTIVEGTLTILSRSK-PTHIQVVLKEV |
| 2E0A Chain:A ((93-349)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------QKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYKDACTVDPVTNQNLQYFLDRFYMNRISTRML-MNQHILIFSDSQTGNPSHIGSIDPNCDVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPD-QPIHIVYVPSHLHHMLFELFKNAMRATVEHQENQPSLTPIEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPTPNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E0A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53889 for 1221 contacts (-44.1/contact) +
2D Compatibility (PS) -20486 + (NN) -8086 + (LL) 15960
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -74701.0 ( -61.18 by residue)
QMean score : 0.462
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