Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKHHYFLAFFYGSVIIFAICFVIIDSLGVNLVHLYQTSRLWLIEQLIFSIFFLSLAVTILLLLTWFLLDDNSKRQINHNLRRILNNQSINVTDDGTEISTNIQRLSKKMNLMTASLQSKENSRILKSQEIVKQERKRIARDLHDTVSQDLFAASMVLSGIAQNVSQLD----V-----------DQVGSQLLAVEEMLQHAQNDLRILLLHLRPVELENKTLSEGFKMILKELTDKSDIEVVYHESI--LTLPKKIEDNIFRIGQEFISNTLKHSQAS----RLEVYLNQTENELQLKMIDNGIGFDMDS------------VYDLSYGLKNIEDRVEDLAGNLQLLSQPDKGVAMDIRLPLVNQNEDKNG |
| 2C2A Chain:A ((21-250)) | --------------------------------------------------------------------------------------------------------------------------------------------TEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLC--DLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD---TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDRA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13684 for 1495 contacts (9.2/contact) +
2D Compatibility (PS) -19769 + (NN) -3347 + (LL) 12972
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -5010.0 ( -3.35 by residue)
QMean score : 0.308
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