Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALFSKKDKYIRISPNKALGSSDKRSLPEVPDELFAKCPSCKHMIYQKDLGLAKICPACSYNFRISAQERLLLTVDEDSFEELFTGIETKDPLNFPNYREKLAATRQKTNLDEAVVTGLAKIKGQTTALAIMDSHFIMASMGTVVGEKLTRLFELATEKKLPIVIFTASGGARMQEGIMSLMQMAKVS-AAVKRHSNQGLFYLTILTDPTTGGVTASFA---MEGDIILAEPQALVGFAGRRVIETTVRED-LP-------------EGFQKAEFLLEHGFVDAIINRTELRDCIAQLIAFHGNEVGHE
3N6R Chain:B ((292-518))-----------------------------------------------------TLVPD-NPNTPYDMKELIHKLADEGDFYEIQEE------------------------FAKNIITGFIRLEGRTVGVVANQPLVLAGCLDIDSSRKAARFVRFCDAFEIPLLTLIDVPGFLPGTSQEY-GGVIKHGAKLLYAYGEATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVAVMGAKGATEIIHRGDLGDPEKIAQHTADYEERFANPFVASERGFVDEVIQPRSTRKRVARAFASLRNKSVQM


General information:
TITO was launched using:
RESULT:

Template: 3N6R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145921 for 1692 contacts (-86.2/contact) +
2D Compatibility (PS) -22680 + (NN) -10981 + (LL) 4620
1D Compatibility (HY) -5600 + (ID) 1950
Total energy: -182512.0 ( -107.87 by residue)
QMean score : 0.405

(partial model without unconserved sides chains):
PDB file : Tito_3N6R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N6R-query.scw
PDB file : Tito_Scwrl_3N6R.pdb: