Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MALFSKKDKYIRISPNKALGSSDKRSLPEVPDELFAKCPSCKHMIYQKDLGLAKICPACSYNFRISAQERLLLTVDEDSFEELFTGIETKDPLNFPNYREKLAATRQKTNLDEAVVTGLAKIKGQTTALAIMDSHFIMASMGTVVGEKLTRLFELATEKKLPIVIFTASGGARMQEGIMSLMQMAKVS-AAVKRHSNQGLFYLTILTDPTTGGVTASFA---MEGDIILAEPQALVGFAGRRVIETTVRED-LP-------------EGFQKAEFLLEHGFVDAIINRTELRDCIAQLIAFHGNEVGHE |
3N6R Chain:B ((292-518)) | -----------------------------------------------------TLVPD-NPNTPYDMKELIHKLADEGDFYEIQEE------------------------FAKNIITGFIRLEGRTVGVVANQPLVLAGCLDIDSSRKAARFVRFCDAFEIPLLTLIDVPGFLPGTSQEY-GGVIKHGAKLLYAYGEATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVAVMGAKGATEIIHRGDLGDPEKIAQHTADYEERFANPFVASERGFVDEVIQPRSTRKRVARAFASLRNKSVQM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N6R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145921 for 1692 contacts (-86.2/contact) +
2D Compatibility (PS) -22680 + (NN) -10981 + (LL) 4620
1D Compatibility (HY) -5600 + (ID) 1950
Total energy: -182512.0 ( -107.87 by residue)
QMean score : 0.405
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