Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKIIAVDLDGTLLHNNNTI-SDYTADTLRKVQAQGHKVIITTGRPYRMALAHY-LRLDLKTPMINFNGALTHIPEKKWAFERSATIDKKLLLETLNL-SDAIQADFIASEYRKNFYITMDNRDK--INPQLFGVNEITDKMALDVTKITRNPNALLMQTRHKDKYELAKELRQHFNHELEVDSWGGPLNILEFSPKGVNKAYALKHLLKSLNLSQENLIAFGDEHNDTEMLAFAHTGYAMKNANPTLLPYADQQIQWTNEEDGVAKTLEKLLL |
| 1RLM Chain:A ((2-263)) | -AVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQL-ISFFPELKDEISFVAENGALVYEH--GKQLF-HGELTRHESRIVIGELLKDKQLN-FVACGLQSAYVSENAPEAFVALMAKHYH-RLKPVKDY--QEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKP-VTS-GFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYA-TDDNNHEGALNVIQAVLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RLM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70200 for 2206 contacts (-31.8/contact) +
2D Compatibility (PS) -27983 + (NN) -14963 + (LL) 776
1D Compatibility (HY) -10400 + (ID) 2350
Total energy: -125120.0 ( -56.72 by residue)
QMean score : 0.489
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