Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQKNNRLGYFGRQKQAFDDYVFLTKAK--MKAERDYFASEGESDPERLAA--QKARDQEFLKSLKKVGIGFIAFLLFYAIVRTVLGLW
1E68 Chain:A ((1-70))
MAKEF------GIPAAVAGTVLNVVEAGGWVTTIVSILTAVGSGGLSLLAAAGRESIKAYLKKEIKKKG-------------KRAVIAW
General information:
TITO was launched using:
RESULT:
Template:
1E68.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10752 for 462 contacts (23.3/contact) +
2D Compatibility (PS) -6917 + (NN) -790 + (LL) 2008
1D Compatibility (HY) -2400 + (ID) 600
Total energy: 2053.0 ( 4.44 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_1E68.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E68-query.scw
PDB file :
Tito_Scwrl_1E68.pdb
: