Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEWIKENMIYVIAIGLLLIFSGVAVYRSVTQNKSQSPQVEHMKPLDSSSSSMDESETTDEKNYRTAKLKLEHPYSESSEEQKQEVRKAFDEAIKAIQQANHLTEVKGTLDNHLSMSQDGMIQTLAMAILVNQYSYQSSKLEVTPSENEDVVQFLIVLTKQGEDSCYFVGNFNTTVSQIQLKAYVGGNIGGTFG |
4GIP Chain:A ((1-81)) | -----------LDPAALMQIGVIPTNVRQLMYYTEASSAFIVVKLMPTIDSPISGCNITSISSYNATVTKLLQPIGENLETIRNQLIPTRRR------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GIP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 850 for 280 contacts (3.0/contact) +
2D Compatibility (PS) -8331 + (NN) 18 + (LL) 8276
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -2237.0 ( -7.99 by residue)
QMean score : 0.337
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