Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTISNQELTLT-PLRGKSGKAYIGTYPN--------GERVFVKYNTTP-----------ILPALAKEQIAPQLLWARRTSNGDMMSAQEWLDGRTLTKEDMG----SKQIIHILLRLHKSRPLVNQLLQLGYKIENPYDLLMDWEKQTPIQI----------------RENTYLQSIVTELKRSLPEFRTEVATIVHGDIKHSNWVITTSGLIYLVDWDSVRLTDRMYDVAYILSHYI-------------------PQKHWKDWLSYYGYKDN-----------EKVWSKIIWYGQFSYLSQIIKCFDKRDMEHVNQEIYELRKFRELIKKHNAS |
| 1NW1 Chain:A ((76-396)) | -------LRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIF-----SGGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPIWKEPD------YLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISL-SKSPVTFCHNDLQEGNILLPK--RLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVELSPVGFGFADYGRDRLSLYFKHKQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78778 for 1643 contacts (-47.9/contact) +
2D Compatibility (PS) -22935 + (NN) -5420 + (LL) 852
1D Compatibility (HY) -12000 + (ID) 1650
Total energy: -119931.0 ( -73.00 by residue)
QMean score : 0.330
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