Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKEKMMSFMTIASIALLGSGVVCANDVADPVAGTTDVVVVPVSPQPTTPSEHTGTDTTNKIVDSTKPSEDKVADSTDQLIPPVKSDLETSEDKVTDPTETKPSKEKTEEPVKSNDSEVIPEQPKSEEVKKAEENTGASTTETPKPVTKPVIETPIVTNTGYTVLGTQDGNVWVQTETGNVLKPAIAIGAVKQKDGTVALKTKDGKLEVLPSTGETKTILAIL-----GGLAILGAIWVGWKENIKKYL-TFLKKKSKK----- |
1E68 Chain:A ((1-70)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAKEFGIPAAVAGTVLNVVEAGGWVTTIVSILTAVGSGGLSLLAA---AGRESIKAYLKKEIKKKGKRAVIAW |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E68.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5633 for 377 contacts (-14.9/contact) +
2D Compatibility (PS) -6285 + (NN) -4304 + (LL) 9808
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -12314.0 ( -32.66 by residue)
QMean score : 0.313
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