Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYLEQLKEVNPLTICITNNVVKNFTANGLLALGASPAMSECIEDLEDLLKVANALLINIGTLTKE-SWQLYQEAIKIANKNQVPVVLDPVAAGASRF-RL---E-VSLDLLKNYSISLLRGNGSEIAALVGEKQASKGADGGKVADLESIAVKANQVF-DVPVVVTGETD-AIAVRGEVRLLQNGSPLMPLVTGTGCLLGAVLAAFIGSSDRSDDLACLTEAMTVYNVSGEIAEKVAKGKGVGSFQVAFLDALSQMKSEMIMDK
1JXH Chain:A ((97-270))
-------------------------------------------------------TTKIGMLAETDIVEAVAERLQRHH--VRNVVLDTVML----LLSPSAIETLRVRLLP--QVSLITPNLPEAAALLDAPHA----RTE--QEMLAQGRALLAMGCEAVLMKG----DWLFTREGEQRF---RVNTKNTHGTGCTLSAALAALRPRHRS--WGETVNEAKAWLSAALAQADTLEVGKGIGPVHHFHAWW------------
General information:
TITO was launched using:
RESULT:
Template:
1JXH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100334 for 1072 contacts (-93.6/contact) +
2D Compatibility (PS) -15604 + (NN) -3813 + (LL) 4836
1D Compatibility (HY) -2000 + (ID) 1650
Total energy: -118565.0 ( -110.60 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_1JXH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JXH-query.scw
PDB file :
Tito_Scwrl_1JXH.pdb
: