Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MATIKEIKAILETIVDLKDKRWQEYQT-----------DSRAGVQ-KAILQRKKNIQSDLDEEARLEQMLVYEKKLYIEHINLIAGIDEVGRGPLAGPVVAAAVIL----PPNCKIKHLNDSKKIPKKKHQEIYQNILDQALAVGIGIQDSQCIDDIN-----IYEATKHAMIDAVSHLSVA-----PEHLLIDAMV-------------LDLSIPQTKIIKGDANSLSIAAASIVAKVTRDKIMSDYDSTYPGYAFSKNAGYGTKE-HLEGLQKYG---ITPIHRKSFEPIKSML------ |
| 2D0B Chain:A ((2-309)) | SNYVIQADQQLLDALRAHYEGALSDRLPAGALFAVKRPDVVITAYRSGKVLFQGKAAEQEAAKWISGASASNETADHQPSALAAHQLGSLSAIGSDEVGTGDYFGPIVVAAAYVDRPHIAKIAALGVKDSKQLNDEAIKRIAPAIMETV-PHAVTVLDNPQYNRWQRSGMPQTKMKALLHNRTLVKLVDAIAPAEPEAIIIDEFLKRDSYFRYLSDEDRIIRERVHCLPKAESVHVSVAAASIIARYVFLEEMEQLSRAV-GLLLPKGAGAIVDEAAARIIRARGEEMLETCAKLHFANTKKALAIAKRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D0B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77558 for 1926 contacts (-40.3/contact) +
2D Compatibility (PS) -25821 + (NN) -291 + (LL) 36
1D Compatibility (HY) -3200 + (ID) 2400
Total energy: -109234.0 ( -56.72 by residue)
QMean score : 0.354
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