Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKGLIATLILLTILVVGELFYNKSEKHLNLSEKQVVKIGILQYV-PHDALDAIEKGVEDGLAQEGYKGKKVKLTVLNAEADQSKIQAMSKQLVNHHNDILIGIATPS----AQGLAASTKDTPIIMGAVSDPLGAKLVTNMKKPTTNVTGLSNVVPTKQTVQLIKDITPNVKRIGILYASSE-D-NSVSQVTEFTKYAQKAGLEVLKY-S---VPSTNEIKTSMSVM---TKKVDAVFVPQDNTIASAFRTVIVAANQ--ANIPVYSSVDTMVE---QGSIASVAQSQYGLGLETAKQAIKVLRGKPVKDVPVKVIDTGKPSLNLKAAKHLGIKIPKKIMKQAEITVKVDD |
| 2FEP Chain:A ((16-269)) | ------------------------------------TTTVGVIIPDISSIFYSELARGIEDIATMYKYN-----IILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEFKR--SPVPIVLAASV-EEQ---------EETPSVAIDYEQAIYDAVKLLVDK--GHTDIAFVSGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKKPTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIVELPHRIELRKSTK------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FEP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77156 for 1919 contacts (-40.2/contact) +
2D Compatibility (PS) -25630 + (NN) -12796 + (LL) 5516
1D Compatibility (HY) -4800 + (ID) 1500
Total energy: -116366.0 ( -60.64 by residue)
QMean score : 0.497
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