Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIDFRAEVDKRKDALMDDLINLLRINSERDDSQADAEHPFGPGPVKALEFFLEMAERDGYETKNVD--------NYAGHFTFGQGEEELGIFGHLDVVPAGSGWDTDPYEPVIKDNRLYARGSSDDKGPTMACYYALKIIKELGLPTSKKVRFVVGTDEESGWGDMDYYFEHVGLPKPDFGFSPDAEFPIINGEKGNITGYLHFSGENKGAVRLHSFSGGLRENMVPESATARFTSHLDQTTLGASLADFASKHNLKAELSVEDEQYTATVYGKSAHG-STPQEGVNGATYLALYLSQFDFEGPARAFLDVTANIIHEDFSGEKLGVAYEDDCMGPLSMNAGVFQFDE--TN--DDNTIALNFRYPQGTDAKTIQTKLEKLNGVE---K--VTLSD-HEHTPHYVPM-DDELVSTLLAVYEKQTGLKGHEQVIGGGTFGRLLE-RGVAYG-AMFPGDENTMHQ-ANEYMPLENIFRSAAIYAEAIYELIK |
| 1CG2 Chain:A ((8-391)) | --NVLFQAATDEQPAVIKTLEKLVNIETGTGD---------AEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKG-RGGKNLLLMSHMDTVYLKGILAKAPFR--VEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDLIQEEA-KLADYVLSFEPTSA------G--------------------------DE--------------------------KLSLGTSGIA-----YVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNID----------------------------DKAKNLRFNWTIAKAGNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQKKLPEADVKVIVTRGRPAFNAGEGGKKLVDKAVAYYKEAGGTLGVEERTGGGTDAAYAALSGKPVIESLGLPG-FGYHSDKAEYVDISAIPRRLYMAARLIMDLGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49351 for 3064 contacts (-16.1/contact) +
2D Compatibility (PS) -38329 + (NN) -12237 + (LL) 5936
1D Compatibility (HY) -7600 + (ID) 3650
Total energy: -105231.0 ( -34.34 by residue)
QMean score : 0.410
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