Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGIDKIGFATSQYVLEMTDLAIARQVDPEKFSKGLLLDSLSITPVTEDIVTLAASAANDILS--DEDKETIDMVIVATESSIDQSKAASVYVHQLLEIQPFARSFEMKEACYSATAALDYAKLHVEKHPDSKVLVIASDIAKYGIKS---TGESTQGAGSIAMLISQNPSILELKE----DRLAQTRDIMDF-W---RPNYSD--VPY-VNGMFSTKQYLDMLKTTWKEYQKRFNTSLSDYAAFCFHIPFPKLALKGFNKILDNNLDEQKKAELQENFEHSITYSKKIGNCYTGSLYLGLLSLLENSQNLKAGDQIAFFSYGSGAVAEIFTGQLVDGYQNKLQSDRMDQLNKRQKITVTEYEKLFFEKTILDENGNANFNTYRTGTFSLDSICEHQRIYKKINN |
| 1UB7 Chain:A ((2-321)) | --SGILALGAYVPERVMTNADFEAYLDTSDEWIVTRTGIKERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLK--AFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKIIDWNDRATAVLFGDGGGAAVVGKVREGYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLP----------WERVAVN---VDRYGNTSTASIPLALKEAVDAG-RIREGDHVLLVSFGAGLTWAAAVLTWGGA------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159188 for 2833 contacts (-56.2/contact) +
2D Compatibility (PS) -32404 + (NN) -14526 + (LL) 5784
1D Compatibility (HY) -2400 + (ID) 2750
Total energy: -205484.0 ( -72.53 by residue)
QMean score : 0.442
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