Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYEKLLERFLTYVKINTRSNPNSTQTPTTQSQVDFALTVLKPEMEAIGLKDVHYLPSNGYLVGTLPATSD-RLCHKIGFISHMDTAD-FNA----ENITPQIV-DYKGGDIELGDSGYILSPKDFPNLNNYHGQTLITTDGKTLLGADDKSGIAEIMTAMEYLASHPEIEHCEIRVGFGPDEEIGI-GADKFDVKDFDVDFAYTVDGGPLGELQYET------------------FSAAGLELTFEG-RNVHPGTAKNQMI-NALQLAMDFHSQLPENE---------------RPEQT------------------------D-----------------------------------------------------GYQGFYHLYDLSGTVDQAKSSYIIRDFEEVNFLKRKHLAQDIADNMNEALQSERVKVKLYDQYYNMKKVIEKDMTPINIAKEVMEEL-DIKPIIEPIRGGTDGSKISFM--GIPTPNLFAGGENMHGRFEFVSLQTMEKAVDVILGIVAKD |
| 3MRU Chain:A ((12-485)) | -SPAPLWQFFDKICSIPHPSKH----------EEALAQY-IVTWATEQGFD-VRRD-PTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYI--------------------------DGEWVTAKGT-TLGADNGIGMASCLAVLASK-E---IKHGPIEVLLTIDEEAGMTGAFGLEAGWLKGDILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQELDLRLVEFRGGSLRNAIPREAFVTVALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDAQVFAIADQQRFIAALNACPNGVMRMSDEVEGVVETSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELA-------GAQIEFSGAYPGWK--PDADSEIMAIFRDMYEGIYGHKPNIMVIHAGLECGLFKEPYPNMDMVSFGPTIKFPHSPDEKVKIDTVQLFWDQMVALLEAI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86437 for 2668 contacts (-32.4/contact) +
2D Compatibility (PS) -37644 + (NN) -14226 + (LL) 1392
1D Compatibility (HY) -6800 + (ID) 3350
Total energy: -147065.0 ( -55.12 by residue)
QMean score : 0.346
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