Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITIDKILEILKNDHNFREILFHEHYYYNWTQNVTFNALSYDSRQISSDTLFFAKGATFKKEYLDSAITAGLSFYVSEIDYGADIPVILVNDIKKAMSLISMSFYNNPQNKLKLLAFTGTKGKTTAAYFAYHMLKVNHRPAMLSTMNTTLDGKSFFKSHLTTPESLDLFRMMATAVENQMTHLVMEVSSQAYLTKRVYGLTFDVGVFLNISPDHIGPIEHPTFEDYFFHKRLLMENSNAVVVNSQMDHFNIVKEQVEYIPHDFYGDYSENVITESQAFSFHVKGKLENTYDIKLIGKFNQENAIAAGLACLRLGVSIEDIKNGIAQTTVPGRMEVLTQTNGAKIFVDYAHNGDSLKKLLAVVEEH-QKGDIILVLGAPGNKGQSRRKDFGDVINQHPNLQVILTADDPNFEDPLVISQEIASHINRPVTIIIDREEAIANASTLTNCKLDAIIIAGKGADAYQIIKGNRDNYSGDLEVAKKYLKR |
3MVN Chain:A ((317-440)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLEVKGVVNNITVYDDFAHHPTAITATIDALRAKVGQQRILAVLEP-R------KHELATSLQ--DADSVFIYQP-------WQVSEVLANLAQ-PAISADDVDELVMRIVQQAK-PNDHILIMSNGAF------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65736 for 776 contacts (-84.7/contact) +
2D Compatibility (PS) -11240 + (NN) -1585 + (LL) 24856
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -57405.0 ( -73.98 by residue)
QMean score : 0.610
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