Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEIDYKKVTGMIHSTESFGSVDGPGIRFIIF--MQGCKMRCQYCHNPDTWEMETNNSKERTVEDVLKEALRYKHFWGKDG--GITVSGGEAMLQIDFITALFIEAKKLGI-HTTLDTCGFAYRATPEYHAILEKLLDVTDLVLLDLKEIDPEQHKIVTRQSN--KNILQFARYLSDRGTPVWIRHVLVPG-----LTDIDDHLKRLGEFVQTLDNVDK-------------FEVLPYHTMGEFKWRE---------------------LGIPYPLAGVKPPTPERVK------------------NAKDIMKTESYTEYLKRIQN----------------------- |
| 1TV8 Chain:A ((3-329)) | ----------------EQIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLT-FDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNG--LLLKKHGQKLYDAGLR---RINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYGCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65070 for 1684 contacts (-38.6/contact) +
2D Compatibility (PS) -26234 + (NN) -16880 + (LL) 1992
1D Compatibility (HY) -8400 + (ID) 2200
Total energy: -116792.0 ( -69.35 by residue)
QMean score : 0.368
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