Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKQGEPDPESNSALKFVLDRAKQAQVPKHVIDKAIDKAKGNTDETFVEGRYEGFGPNGSMIIVDTLTSNVNRTAANVRTAYGKN-GGNMGASGSVSYLFDKKGVIVFAGD-------DADTVFEQLLEADVDVDDVEAEEGTITVYTAPTDLHKGIQALRDNGVEEFQVTELEMIPQSEVVLEGDDLETFEKLIDALESDDDVQKVYHNVADF
1MW7 Chain:A ((21-240))
--------------------KVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEG-NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEV--EDKIIIRGDYNSFKLLNEGFESLK-LPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE--
General information:
TITO was launched using:
RESULT:
Template:
1MW7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38983 for 1572 contacts (-24.8/contact) +
2D Compatibility (PS) -23567 + (NN) -15336 + (LL) 1736
1D Compatibility (HY) -12000 + (ID) 2900
Total energy: -91050.0 ( -57.92 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_1MW7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MW7-query.scw
PDB file :
Tito_Scwrl_1MW7.pdb
: