Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYSFEELLATMTLITAAEIEDK-IDSNQDFVLFIGRISCPFCHLFVPKIVEVADED--EFELFHLDSEDFDHWTANKEFRNKYDIPTVPGLMVVKNG-TI-KVKCDSKMTKEEIREFIG
1T00 Chain:A ((3-103))
--------GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENP------GTAAKYGVMSIPTLNVYQGGEVAKTIV-GAKPK-AAIVRDLE
General information:
TITO was launched using:
RESULT:
Template:
1T00.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66807 for 701 contacts (-95.3/contact) +
2D Compatibility (PS) -9741 + (NN) -314 + (LL) 1464
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -81098.0 ( -115.69 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_1T00.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T00-query.scw
PDB file :
Tito_Scwrl_1T00.pdb
: