Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNKVQERRERKIKEAIKAKNWDEVTRLLQQEQSNAERRDRYHNRRIKDETIASKNAKKSVRYDVIASSDLNPEEALILEELRQAIREAKASLSEIDSKIVEMIAE----QGSSYKETARYITEHYKKMSDVTVKSHYCKALKKLAPLLKAYR
1TTY Chain:A ((320-383))
---------------------------------------------------------------------------------MREELEKVLKTLSPREAMVLRMRYGLLDGKPKTLEE----VG-QYFNVTRERIRQIEVKALRKLRHPSR---
General information:
TITO was launched using:
RESULT:
Template:
1TTY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5683 for 370 contacts (-15.4/contact) +
2D Compatibility (PS) -6154 + (NN) -767 + (LL) 7436
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -8918.0 ( -24.10 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_1TTY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TTY-query.scw
PDB file :
Tito_Scwrl_1TTY.pdb
: