Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITKEQYFYFRQLDDFKHFTIEQFDHIVSHIKHRTALKNHTLFFEGDYREKLFLIQSGHVKIEQSDASGSFIYTDYVRQGTVFPYGGLFLDDDYHFSAVAITDIEYFSLPMALYEEYSLQNINQMKHLCRKYSKLLRVHEIRLRNMVTSSASMRVIQSLATLLLQVPTER---GHLPFPITTIEIANMSGTTRETVSHVLKELRQKDIVEMKGKKLLYNNKNYFKKFIE
3I54 Chain:A ((23-248))
--QSHMDEILARAGIFQGVEPSAIAA-----QPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSMDRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLVGASRETVNKALADFAHRGWIRLEGKSVLISDSERLARRA-
General information:
TITO was launched using:
RESULT:
Template:
3I54.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91429 for 1634 contacts (-56.0/contact) +
2D Compatibility (PS) -23338 + (NN) -6827 + (LL) 1132
1D Compatibility (HY) -7200 + (ID) 2200
Total energy: -129862.0 ( -79.47 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_3I54.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I54-query.scw
PDB file :
Tito_Scwrl_3I54.pdb
: