Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIRQLRYFITIAQEQKITSAAKKLHMAQPPLSRQLKQLEDELGVVLFDRNKKKQMTLTYEGAVFLKRAKEILHRFEDAVIEVQELKEEVAGTLAVGSTIYCA-ALMLEKVTQIKERYPHLTFNIWENEPATLLELLESRQIDAAVTTTLIKSDTVQFKQLDDIPCVLVLSDEAGYPCG--DTIKMVDIPSFPLILLRPVNGK--GVYNQVMNEFHRLNLEPRIVCECHDSATLLSLVSSGFGASILPVTMIPVHMRNHVHTVHIENNPFIMTPAVMWRTDSYLPKPAQQFLDLF
2H9B Chain:A ((89-289))------------------------------------------------------------------------------------------EKTIRIGFVGSLLFGLLPRIIHLYRQAHPNLRIELYEMGTKAQTEALKEGRIDAGFGRLKISDPAIKHSLLRNERLMVAVHASHPLNQMKDKGVHLNDLIDEKILLYP--SSPKPNFSTHVMNIFSDHGLEPTKINEVREVQLALGLVAAGEGISLVPASTQSIQ-LFNLSYVPLLDPDAITPIYIAVRNME-ESTYIYSLYETI


General information:
TITO was launched using:
RESULT:

Template: 2H9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 990 -159354 -160.96 -813.03
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -160.96
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_2H9B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2H9B-query.scw
PDB file : Tito_Scwrl_2H9B.pdb: