Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSDTSPNGLSRREELLAVATKLFAARGYHGTRMDDVADVIGLNKATVYHYYASKSLILFDIYRQAAEGTLAAVHDDPS---W-TAREALYQYTVRLLTAIASNPERAAVYFQEQPYITEWFTSEQVAEVREKEQQVYEHVHGLIDRGIASGEFYE-CDSHVVALGYIGMTLGSYR-WLRPS-GRRTAKEIAAEFSTALLRGLIRDESIRNQSPLGTRKET
5EYR Chain:A ((26-218))
--------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAA-----RATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGE---------------
General information:
TITO was launched using:
RESULT:
Template:
5EYR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93383 for 1324 contacts (-70.5/contact) +
2D Compatibility (PS) -20239 + (NN) -8275 + (LL) 724
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -128123.0 ( -96.77 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_5EYR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5EYR-query.scw
PDB file :
Tito_Scwrl_5EYR.pdb
: