Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAISCSPRPRYASRMPVLSKTVEVTADAASIMAIVADIERYPEWNEGVKGAWVLARYDDGRPSQVRLDTAVQ-GIEGTYIHAVYYPGENQIQTVMQQ-GELFAKQEQLFSVVATG-AASLLTVDMDVQVTMP----VPEP---------MVKMLLNNVLEHLAENLKQRAEQLAAS
4XRW Chain:A ((170-328))
-------------ELTFSFTDTVRIDAPAKDVYDFVDQAALWAERLPHVSSVDLREPSPG--LQVLRMDTRAKDGSVHTTESVRVCFPHHRIVYKQTTLPALMTLHTGRWDFAEEPG--TTASSEHTVVLNTANIAKVLGAGAGVAEAREFVRTALSTNSRATLGFAKDHAEAR---
General information:
TITO was launched using:
RESULT:
Template:
4XRW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69564 for 987 contacts (-70.5/contact) +
2D Compatibility (PS) -16056 + (NN) -12783 + (LL) 1240
1D Compatibility (HY) 1200 + (ID) 1050
Total energy: -97013.0 ( -98.29 by residue)
QMean score : 0.312
(partial model without unconserved sides chains):
PDB file :
Tito_4XRW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XRW-query.scw
PDB file :
Tito_Scwrl_4XRW.pdb
: