Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKITGTVVKLGIVSVVLLFFTVMIIVIFGQMRFDRTNGYTAEFSNVSGLRQGQFVRASGVEIGKVKALHLVDGGRRVRVEFNIDRSVPLYQSTTAQIRYSDLIGNRYVELKRGEGKGANDLLPPGGLIPLSRTSPALDLDALIGGFKPVFRALDPAKVNNIANALITVFQGQGGTINDILDQTAQLTSQIAERDQAIGEVVKNLNIVLDTTVKHRKEFDETVNNLENLITGLRNHSDQLAGGLAHISNGAGTVADLLAENRTLVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWNGFQAGGPVRTVKLFSQPTGRCTPQ |
4K12 Chain:B ((1-82)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDSERDKARKEVEEYVKKIVGESYAKSTK--KRHTITVALVNELNNIKNEYLNKIVE-STSESELQILMMESRSKVDEAVSKFEK------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19155 for 525 contacts (-36.5/contact) +
2D Compatibility (PS) -8603 + (NN) -4097 + (LL) 16112
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -19793.0 ( -37.70 by residue)
QMean score : 0.594
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