Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMSVLARMRVMRHRA----WQGLVLLV--LALLLSSCGWRGISNVAIPGGPGTGPGSYTIYV--------QMPDTLAINGNSRVMVADVWVGSIRAIKLKNWVATLTLSLKKDVTLPKNATAKIGQTSLLG-SQHVE--LAAPPDPSPVPLKDGDTIPLKRSSAYPTTEQTLASIATLLRGGGLV------NLEGIQQEINAIVTGRADQIRAFLGKLDTFTDELNQQRDDITRAIDSTNRLLAYVGGRSEVLNRVLTDLPPLIKHFADKQELLINASDAVGRLSQSADQYLSAARGDLHQDLQALQCPLKELRRAAPYLVGALKLILTQPFDVDTVPQLVRGDYMNL-----SLTLDLTYSAIDNAFLTGTGFSGALRALEQSFGRDPETMIPDIRYTPN--PNDAPGGPLVERGNRQC---------------------------------------- |
| 4DVZ Chain:A ((308-829)) | LMGSHNGKVSLLYAGDKHDWNATVGYKDNVATLINVHMKNGSGLVIAGGEKGINNPSFYLYKEDQLTGSQRALSQEEIRNKVDFMEFLAQNNTKLDNLSEKEKEKFQNEIEDFQKDSKAYLDALGNDRIAFVSKKDTKHSALITEFNNGDLSYTLKDYEKNVTLQGSLKHDGVMFVDYSFNKVAVFNLPDLNNLAITSFVRRNLENKLTAKGLSLQEANKLIKDFLSSNKELAGKALNFNKAVAEAKSTGN-YDEVKKAQKDLEKSLRKREHLEKEVEKKLESKSGNKKAQANSQKDEIFALINKEANRDARAIAYTQNLKGIKRELSDKLEKISKDLKDFSKSFDEFKNFSKAEETLKALKGSVKDLGINPEWISKVENLNAALNEFKNGDFSKVTQAKSDLENSVKDVIINQKVTDKVDNLNQAVSVAKAMGDFSRVEQVLADLKNFSKEQLAQQAQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DVZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38049 for 2717 contacts (-14.0/contact) +
2D Compatibility (PS) -39642 + (NN) 8033 + (LL) 192
1D Compatibility (HY) 7600 + (ID) 1700
Total energy: -63566.0 ( -23.40 by residue)
QMean score : 0.090
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