Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHGMVLGKFMPPHAGHVYLCEFARRWVD--ELTIVVGSTAAE--PIPGAQRVAWMRELFPFDRVVHLANENP--QRPWEHPDFWDIWKASLQGVLATRPD-FVFGAEPYNADFAQVLGA----------------------------------RFVAVDHGRTVVPVTATDIRADPL--GHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWVPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLAGGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELVRARR |
| 4YBR Chain:A ((5-200)) | RRLGVMGGTFDPIHYGHLVAASEVADLFDLDEVVFVPSGQP--RQVSAAEHRYLMTVIATASNPRFSVSRVDIDRGGPTYTK----DTLADLHALHP-DSELYFTTGADALASIMSWQGWEELFELARFVGVSRPGYELRNEHITSLLGQLAKDALTLVE--IPALAISSTDCRQRAEQSRPLWYLMPDGVVQYVSKRRLY--------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90732 for 1114 contacts (-81.4/contact) +
2D Compatibility (PS) -15745 + (NN) -4433 + (LL) 12116
1D Compatibility (HY) -2000 + (ID) 1050
Total energy: -101844.0 ( -91.42 by residue)
QMean score : 0.410
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