Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPRRWLRAVAVIGATAM-------------LLASSCTWQLS----LFITDGVPPPPGDPV-------------PPVDTHAGGRPADQLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATA--YAAGHPL |
| 1THF Chain:D ((1-253)) | MLAKRIIACLDVKDGRVVKGSNFENLRDSGDPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVENPSLITQIAQTFGSQA-VVVAIDAKRVD-GEFMVFTYSGKKNTGILLRDWVVEVEKRGAG-EILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASG------GAGKMEHFLEAFLA----------GAD---AALAASVFHFREIDVRELKEYLKKHGVNVRLEGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1THF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86587 for 1825 contacts (-47.4/contact) +
2D Compatibility (PS) -23798 + (NN) -7231 + (LL) 1088
1D Compatibility (HY) -800 + (ID) 1300
Total energy: -118628.0 ( -65.00 by residue)
QMean score : 0.266
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