Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRPDNEPARLRSVAENLAAEAAAFVRGRRAEVFGISRAGDGDGAVRAKSSPTDPVTVVDTDTERLLRDRLAQLRPGDPILGEEGGGPADVTATPSDRVTWVLDPIDGTVNFVYGIPAYAVSIGAQVGGITVAGAVADVAARTVYSAATGLGAHLTDERG--------RHVLRCTGVDELSMALLGTGFGYSVRCREKQAELLAHVVPLVRDVRRIGSAALDLCMVAAGRLDAYYEHGVQVWDCAAGALIAAEAGARVLLSTPRAGGAGLV----VVAAAPGIADELLAALQRFNGLEPIPD |
3LV0 Chain:B ((42-265)) | ---------------------------------------------------PADYVSQADRKAEKIIFNELSKARPKFGFLMEE---SEEIIGEDSQH-RFIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVIYNPINDELFTAERGSGAFFNDRRCRVSARRRLEDCVIATGMPHL--PGHGT---YLIELRNVMAE--------VSGIRRFGTAALDLAYVAAGRTDGFWEDNLQIWDMAAGILMVREAGGFV---TDKEGGNDIFRKKNIIAGNEHIRIKLERALKK--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91819 for 1762 contacts (-52.1/contact) +
2D Compatibility (PS) -22726 + (NN) -9089 + (LL) 4008
1D Compatibility (HY) -14800 + (ID) 4000
Total energy: -138426.0 ( -78.56 by residue)
QMean score : 0.412
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