Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METYDIAIIGTGSGNSILDERYAS--KRAAICEQ-GTFGGTCLNVGCIPTKMFVYAAEVAKTIRG-ASRYGIDA-HIDRVRWDDVVSRVFGRIDPIALSGEDYRRC-APNIDVYRTHTRFGPVQADGRYLLRT--DAGEEFTAEQVVIAAGSRPVIPPAILASGVDYHTSDTVMRIAELPEHIVIVGSGFIAAEFAHVFSALGVRVTLVIRGSCLLRHCDDTICERFTRIAST-K-WELRTHRNVVDGQQRGSGVAL--RLDDG--CTINADLLLVATGRVSNADLLDAEQAGVDVED-GRVIVDEYQRTSARGVFALGDVSS-PYLLKHVANHEARVVQHNLLCDWEDTQSMIVTDHRYVPAAVFTDPQIAAVGLTENQAVAKGLDISVKIQDYGDVAYGWAMEDTSGIVKLITERGSGRLLGAHIMGYQASSLIQPLIQAMSFGLTAAEMARGQYWIHPALPEVVENALLGLR |
| 2QAE Chain:A ((1-461)) | -NPYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDSAKMQQQKERAVKGL-TGGVEYL-FKKNKVTYYKGEGSFETAH---SIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEG---KRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAGKP------GHVNYGVIPAVIYTMPEVASVGKSEDELKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGR-TCHAHPTMSEALKEACMAL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QAE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -312124 for 3892 contacts (-80.2/contact) +
2D Compatibility (PS) -47361 + (NN) -7253 + (LL) 332
1D Compatibility (HY) -22000 + (ID) 5550
Total energy: -393956.0 ( -101.22 by residue)
QMean score : 0.435
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