Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MPSTLQGLAEYREEIRKSRFHTIAAPVADEDEAQAFIAAHRDASA-GHNCWAWKCGAQYRFSDDGEPGGSAGRPILAAIEGQDMDCVAVLVSRWFGGIKLGTGGLARAYGGGAAKCLQQAPRSELVERCRVRFACAFADHALLKARSLALGASVAAEDYGADGVVLTLELPVARFE-ALQALLVDLSRGQVRPQRLDA--
4Q7O Chain:A ((4-136))
MKNNIFLNLNKKSINNNHFVISIFFETIYQFETKDTLLECFKNITTTGHFGVI---GAQYEKIDA---------------------------TRWIGDYEEVNG-----------------------------------FEYIDKAPSIYFSVG---DDFNPEELIIPINLAYHYFNIAISDFLIAHPEYQKKCKEIQKTY
General information:
TITO was launched using:
RESULT:
Template:
4Q7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32642 for 938 contacts (-34.8/contact) +
2D Compatibility (PS) -14236 + (NN) -6456 + (LL) 4784
1D Compatibility (HY) -7600 + (ID) 1050
Total energy: -57200.0 ( -60.98 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_4Q7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q7O-query.scw
PDB file :
Tito_Scwrl_4Q7O.pdb
: